Salt-free dispersions comprise a special colloidal system in which the liquid phase contains only counterions dissociated from the surface of the dispersed entities. A typical example in practice includes a dispersion of polyelectrolytes such as DNA, RNA, filamentous actin, microtubules and polyacrylic acid (PAA) in an electrolyte-free liquid medium. Although theoretical studies on the transient electrokinetic flow in a salt-free solution are particularly important for analyzing experimental electrokinetic data for nonaqueous media, which contain essentially no salts, no study has been reported to investigate the transient response of electrokinetic flow in a salt-free solution. Therefore, the main objective of this paper is to derive the exact or accurate analytical solution for the transient electrokinetic flow of a salt-free medium containing counterions only in cylindrical capillaries. Based on these results, the corresponding transient electrokinetic transport phenomena such as electro-osmosis velocity, electric current, streaming potential, electroviscous effect, and heat transfer coefficient can be obtained in closed form.