Friday, October 26, 2007: 2:30 PM-4:30 PM
Crepe Myrtle (Greenville Hyatt Regency Hotel)
Medicinal and Biochemistry (3)
Nucleic Acids Posters
Sponsor: Biacore (A division of GE Healthcare), Bruker, ACS Division of Carbohydrate Chemistry
Presider:W. David Wilson
Organizers:Karen L. Buchmueller
W. David Wilson
Insight into Substrate Recognition by MutY, a DNA Repair Glycosylase
Sarah Nicolson, Michelle Hamm
Studies on the Effect of C8 Steric Bulk in the Replication of 8-Oxo-2'-Deoxyguanosine by Different DNA Polymerases
Carlos R. Siekavizza-Robles, Michelle Hamm
Solution-State Structure of Proflavine Intercalating a 2', 5' RNA Duplex
Eric D. Horowitz, Seth Lilavivat, Nicholas V. Hud
Structural Role of Pseudouridines in the Peptidyltransferase Center PTC of Human 28S Ribosomal RNA
Christopher J. Mart, Meredith Newby
Pulsed Field Gradient NMR Analysis of Structural Changes of DNA Induced by Minor Groove Binders
Maryam Rahimian, Arvind Kumar, David W. Boykin, W. David Wilson
Design and Evaluation of Platinum Agents Targeted at Human Telomeric DNA
Lu Rao, Joshua D. Dworkin, Ulrich Bierbach
Competition between Distamycin and the HMG a/t Hook for DNA Binding
Camilo Mateus, Stephanie Pietromonaco, Lawrence Ngo, Paurush Babbar, Christopher Vellano, Alisa Bailey, Karen L. Buchmueller
The Unlikely Binding Mode of Linear Benzimidazole, DB921, to the DNA Minor Groove: A Molecular Dynamics Study
Prashanth Athri, W. David Wilson
Binding Affinity and Folding Topology of PNA-DNA Hybrid G-Quadruplex
Farial A. Tanious, Subhadeep Roy, Danith Ly, Bruce A. Armitage, David Wilson
Effect of Base Mutations in GC Rich Binding Site on Recognition by Minor Groove Binding Dications
Manoj Munde, Mohamed A. Ismail, Pau Peixoto, Catharine J. Collar, Rupesh Nanjunda, Marie-Hélène David- Cordonnier, Amelie Lansiaux, Christian Baily, David W. Boykin, W. David Wilson
Tuning the Binding Affinity and Sequence Selectivity for Alternating and Nonalternating at DNA of Heterocyclic Diamidines
Yang Liu, Arvind Kumar, Chad E. Stephens, David W. Boykin, W. David Wilson
In Silico Prediction of Hfq Residues That Interact with RNA by Hfq Surface Analysis and Docking of An RNA Oligomer to Hfq
Roman Mezencev, Taylor B. Updegrove, Roger M. Wartell
Unmasking the Dissociation Kinetics Under Mass-Transport Limitation
Binh Nguyen, Adalgisa Batista-Parra, David W. Boykin, W. David Wilson
Assessing Hydration Changes for Minor Groove Binders Using Thermal Denaturation
Jihae Park, Andrea Bryant, Natalya Degtyareva, Bret Wallace, Jeffrey T. Petty
Silver Cation Binding with Cytosine Oligonucleotides
Kristine Loo, Bidisha Sengupta, Natalya Degtyareva, Caroline M. Ritchie, Jeffrey T. Petty
Competition Dialysis Studies of Silver Cation Binding with DNA
Julien Nunes, Bidisha Sengupta, Kristine Loo, Caroline M. Ritchie, Jeffrey T. Petty
Sequence Specific Hydration Changes in the Association of DAPI with a/t DNA Sequences
Kerianne Springer, Greg Amend, Natalya Degtyareva, Jeffrey T. Petty
The Effect of Cosolutes on the Interaction of Netropsin with a-Tract Sequences
Megan J. Fresia, Natalya Degtyareva, Jeffrey T. Petty
The Role of Base Specific Interactions in Th E Formation Silver Nanoclusters
Jenna Buckman, Bidisha Sengupta, Caroline M. Ritchie, Jeffrey T. Petty
The Study of Sulfhydryl Group Modifications in Active Site Cysteine of Human Thymidylate Synthase
Stephon Void, Angela W. Peters
Approaches to 8-Azapurine Nucleoside Analogues
Erland P. Stevens, Whitney H. Mudd, Danielle L. Jordan
Gel Electrophoresis Studies of Silver Cluster Complexes with DNA
Sheldon Rudisill, Bidisha Sengupta, Caroline M. Ritchie, Kristine Loo, Jeffrey T. Petty
Sequence Specific Hydration Changes with a/t DNA Sequences
Greg Amend, Natalya Degtyareva, David Matthews, Bret Wallace, Jeffrey T. Petty
Molecular Dynamics Simulations of the Minor Groove Methylating Molecule Me-Lex Binding to the Dickerson Dodecamer
Sridhar Varadarajan, Libero Bartolotti, Heather Hill, Charles Brian Kelly
Ligation of Self-Complementary Oligonucleotides by Reductive Amination
Aaron Engelhart, Trey Maddox, David G. Lynn, Nicholas Hud
Kinetic & Thermodynamic Analysis of Hfq's Influence on RprA & RpoS RNA Duplex Formation
Sean M. Murray, Taylor B. Updegrove, Roger M. Wartell
Characterization of the Binding of Ethidium Bromide to G-Quadruplex DNA
Sonja Brooks, Jason Hudson, David E. Graves
The Binding of Actinomycin D to the G-Quadruplex DNA
Jason Hudson, Sonja Brooks, David Graves
Synthesis of Neomycin-Benzimidazole Conjugates Targeting Nucleic Acid Structures
Nihar Ranjan, Dev P. Arya
Targeting TAR RNA by Neomycin Dimers
Sunil Kumar, Dev P. Arya, Meredith Newby
B-from DNA Targeting by Aminoglycoside Dimers
Sunil Kumar, Honjuan Xi, Meredith Newby, Dev P. Arya
Synthesis of Neomycin-Polyamide Conjugates: A Solution Based Approach
Nick Shaw, Matthew Baker, Dev P. Arya
Atomic Force Microscopy to Investigate DNA Complexes: A New Program to Measure Bending and Lengthening of Helices
Denise S. Tevis, Mark A. Bofill, Arvind Kumar, David W. Boykin, W. David Wilson
DNA Damage Recognition by Endonuclease IV: Molecular Dynamics Study of Alpha Anomeric Damaged DNA
Alexander M. Spring, Richard Cunningham, Markus W. Germann
Analysis of Protein - RNA Interactions for HIV RNA Targeting Zinc Finger Proteins
Subrata H. Mishra, Alexander M. Spring, Markus W. Germann
Evaluation of Protein - RNA Interactions for HIV RNA Targeting Zinc Finger Proteins
Subrata H. Mishra, Alexander M. Spring, Markus W. Germann
The Drug Discovery of Tykerb, A Dual ErbB1/2 Tyrosine Kinase Inhibitor
Karen Lackey

Back to The Southeastern Regional Meeting (October 24 – 27, 2007)